[SLIM-Curve] SLIM Curve plugin - version on update site broken, on github it's fine

Curtis Rueden ctrueden at wisc.edu
Thu Sep 24 11:38:55 CDT 2015


Hi Robert,

[CCing slim-curve mailing list, because public discussion is better.]

> FIJI freezes, when running the plugin as mentioned on its wiki page
> (Click menu Analyse > Lifetime > SLIM Curve). So, the plugin is
> unusable :(

Thanks for the report. I was able to reproduce with a fully updated Fiji +
SLIM-Curve update site.

I fixed the problem [1], and uploaded the new version to the update site.

> when I download the source from Github and compile it using Eclipse,
> the plugin runs fine.

Not sure what you mean by that, but I'm surprised that would make a
difference. There was a legitimate deadlock issue in the code. The main
mystery is why it ever worked at all prior to the latest version of ImageJ.

Anyway, give it a try and let us know if this fix resolves the problem for
you!

Regards,
Curtis

[1]
https://github.com/slim-curve/slim-plugin/commit/f452ad4b8411933450c8bd17d00eb84ac23de7e4

On Thu, Sep 24, 2015 at 2:45 AM, Robert Haase <rhaase at mpi-cbg.de> wrote:

> Hi SLIM Curve plugin maintainers,
>
> I've got a very simple issue with the SLIM curve plugin (
> http://fiji.sc/SLIM_Curve):
>
> * I just downloaded it using the update site (
> http://sites.imagej.net/SLIM-Curve/) in  a current version of FIJI
> (ImageJ 2.0.0-rc-39/1.50b; Java 1.8.0_51) on MacOS 10.10.3
>
> * FIJI freezes, when running the plugin as mentioned on its wiki page
> (Click menu Analyse > Lifetime > SLIM Curve). So, the plugin is unusable :(
>
> * However, when I download the source from Github and compile it using
> Eclipse, the plugin runs fine.
>
> Could anybody of you please update the update site, so that the plugin
> works again? It would be a pitty, if the plugin is lost because of nothing.
>
> If I can assist somehow, just let me know.
>
> Best,
> Robert
>
> --
> Robert Haase
> Bio-Image informatics, Scientific Computing Facility
>
> Max Planck Institute CBG
> Pfotenhauer Str. 108, 01307 Dresden
> room: 106 (s)
> phone: +49 351 210 2972
> fax:   +49 351 210 1689
>
>
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