[SLIM-Curve] sdt file reading error in SLIM curve

Curtis Rueden ctrueden at wisc.edu
Mon Jun 29 13:57:47 CDT 2015


Hi Doogie,

> I am wondering whether you are working on it. Or you got in troubles.
> If you have any suggestions such as converting sdt file into other
> format, please let me know.

I'm CCing the slim-curve mailing list, which is the best place to discuss
these issues.

Unfortunately, I have not had any significant time to work on the SDT
issues. However, I did pass along your issue to Sagar (CCed), the current
maintainer of the SLIM Curve plugin for ImageJ.

Your image appears to be a FIFO image, which is currently not supported in
ImageJ or SCIFIO. But Sagar is actively working on adding support for FIFO
images to our software, since we have some of those here in our lab as well.

Sagar, please let me know if you need any guidance or support on this
project. Or if you have any workarounds that Doogie can use in the meantime.

Regards,
Curtis

On Sat, Jun 27, 2015 at 11:00 PM, Oh, Doogie <doh at cgr.harvard.edu> wrote:

>  Hi Curtis,
>
>
>
> I am wondering whether you are working on it. Or you got in troubles. If
> you have any suggestions such as converting sdt file into other format,
> please let me know.
>
>
>
> Regards,
>
> Doogie
>
>
>
> *From:* ctrueden.wisc at gmail.com [mailto:ctrueden.wisc at gmail.com] *On
> Behalf Of *Curtis Rueden
> *Sent:* Wednesday, April 22, 2015 2:03 PM
> *To:* Oh, Doogie
> *Cc:* slim-curve at imagej.net
> *Subject:* Re: sdt file reading error in SLIM curve
>
>
>
> Hi Doogie,
>
>
>
> > Library not on path Unable to load library 'slim-curve-1.0-SNAPSHOT'
>
>
>
> Thanks for the bug report. I am able to reproduce this issue on my OS X
> system.
>
>
>
> I will investigate further and reply back when there is a fix.
>
>
>
> Regards,
>
> Curtis
>
>
>
> On Fri, Apr 17, 2015 at 1:25 PM, Oh, Doogie <doh at cgr.harvard.edu> wrote:
>
>  Dear Curtis,
>
>
>
> I am trying to load sdt file, but couldn’t get the correct image. Could
> you diagnose the problems? I attach the sdt file and the loading results.
>
>
>
> Best regards,
>
> Doogie Oh, Ph. D
>
> Department of Molecular and Cellular Biology
>
> Applied Physics
>
> Harvard University
>
> 52 Oxford st,
>
> Northwest lab building, Room 358
>
> Cambridge, MA
>
> 02138
>
>
>
>
>
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